Since this is a problem in MultiCharts, there should be a warning that warns users of this ahead of time if this can affect strategy performance when in production.
Another potential idea: allow the user to see the charts that have data from different timezones and choose one chart to change the timezone for. Since this information is known ahead of time, you can route the user to the data manager with the chosen market already searched and selected.
Attachment Screen Shot 2020-08-18 at 54344 PM.png added
It would be helpful if there is a guide to use these two different timezones in MC. Because not only do the timezones need to match between the two or more instruments, but to get them to work in MC, the timezone in MC for both is set to local. So we would need to figure out what the local timezone that MC is referring to is (is it the connection to the data feed, locality of the computer, or just uses the system clock settings) and then use that to properly set the timezones of the data.
I have a concern that because these timezones are off by 1 hour, my strategies may have not had the bars line up at the same time in the training process which could potentially give a "look-ahead bias." It should be checked to see if the SQX engine accounts for this already or produces flawed strategies as a result of this timezone difference between datasets.